Overview / Welcome 3

• Is the Open Science Grid for You?
• Acknowledging the Open Science Grid
• GRACC - OSG Accounting

Usage Accounting 0

Set Up Your Account 3

• Registration and Login for OSG Connect
• Generate SSH Keys and Activate Your OSG Login
• Start or Join a Project in OSG Connect

Learn to Submit HTCondor Jobs 4

• OSG Connect Quickstart
• The "tutorial" Command
• Troubleshooting Condor errors
• Finding OSG Locations

Using Software on OSG Connect 7

• Accessing Software using Distributed Environment Modules
• Compiling Applications for OSG Connect
• Software Transfer via HTCondor or HTTP
• Creating a Docker Container Image
• Accessing Software using Distributed Environment Modules - Archive

See all 7 articles

Data Management 6

• Introduction to Data Management on OSG
• Data Transfer to OSG Connect with Globus
• Using scp to transfer files to OSG Connect
• Transferring data with HTCondor
• Access Stash remotely using HTTP

See all 6 articles

Choosing Resources for Jobs 6

• Steer Your Jobs with HTCondor Job Requirements
• Docker and Singularity Containers
• GPU Jobs
• Large Memory Jobs
• Multicore Jobs

See all 6 articles

Molecular Dynamics 4

• A Simple NAMD Application
• NAMD with input data from Stash using HTTP
• Pegasus - NAMD example
• GROMACS

Drug Discovery 2

• AutoDock Vina
• Managing AutoDock Vina Tasks with Pegasus

Quantum Chemistry 1

• Electronic Structure Calculations with CP2K

Bioinformatics 4

• Sequence Search with BLAST
• Blast Similarity Search with Pegasus
• StashCache-Blast
• Running a BLAST workflow

MATLAB Runtime 4

• Basics of compiled MATLAB applications - Hello World example
• RandomMatrix and Wigner's semi-circle law
• Parameter sweep: Resonance in a driven-damped harmonic oscillator
• Optimization Tool box: Simulated Annealing

R 3

• Run R scripts on OSG
• Calcuating Pi using R
• Adding external packages to your R jobs

Python 3

• Run Python Scripts on OSG
• Virtualenv in Python
• Scaling Up Python

Using FreeSurfer on OSG 9

• What's New in Fsurf 2.0
• Introduction to Fsurf and FreeSurfer
• Setting up Fsurf on Your Computer
• Using Fsurf
• Processing Multiple Subjects Using Fsurf

See all 9 articles

Machine Learning 2

• TensorFlow
• Tensorflow - A simple matrix multiplication

Scale and Optimize Your HTC Work 1

• Scaling up compute resources

Use Workflow Tools on OSG 5

• Makeflow - Quickstart
• Makeflow - Running GROMACS simulations in sequence of steps
• DAGMan - NAMD example
• Pegasus
• Swift

Additional Resources 2

• Contacting the OSG
• Frequently Asked Questions

OSG for HPC Administrators 2

• Submit Node Flocking to OSG
• Overview